The profiles are for the driver itself, and the add-in while relying on the driver for the final conversion to PDF - is slightly different, so there are no profile options for it, and you will need to adjust the settings for the add-in yourself.
The bookmarks do not work when using the driver as the printing program (e.g. Word) does not send the bookmarking information to a printer, as this information is useless typical printers. So, Word strips that data when calling File> Print. Using the Toolbar Addin circumvents this and allows for all the data to be rendered and converted.
If posting files to this forum, you must archive the files to a ZIP, RAR or 7z file or they will not be uploaded. Thank you.